Genomic and Immunotherapy Medical Institute
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Axis 1: Development of new innovative technologies for whole-genome sequencing

Objectives

The objectives of this axis are to propose high-throughput whole-genome sequencing (WGS) as the first-line test for the diagnosis of rare diseases and for screening for genetic predispositions to cancers in very high risk populations (unusually young patients) with a negative  routine gene-panel analysis. This strategy is based on the experience with WES of two already-operational teams of the Institute. In parallel, the teams will evaluate the impact of molecular diagnosis on the management of patients. We will test the contribution of WGS compared with WES for personalized medicine. 

Methods

  • WGS will be proposed to candidate patients
  • Local bioinformatics tools will be used and constantly improved according to needs,
  • The clinical usefulness of WGS will be evaluated by determining its impact on the number of diagnoses and opportunities for inclusion in clinical trials and for performing genetic counseling.

This project will make it possible to implement a technology transfer from WES to WGS and other omics and is an integral part of the France Genomic medicine plan for 2015.